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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015942779.1_cds_XP_016486119.1_76986
CDS Infomation

[gene=LOC107806477] [db_xref=GeneID:107806477] [protein=caffeoylshikimate esterase-like] [protein_id=XP_016486119.1] [location=complement(join(51099..51467,51542..52180))] [gbkey=CDS]
Sequence

ATGAAGCATCCAGTTGCAGAGGCGAACGAGGTCAGCCCATTCGGGTCATTGAGCCCCGAC
GAGTTCTATTCTCACCACTCAGTGAGTCACGGCTCCGAGTTCATCACCAATTCTCGAGGT
CTCAAACTCTTCACTCAGTGGTGGACCCCACTCCCTCCCGCTAACCCTATCGGCGTCGTC
TGCGTTGTTCACGGATTCACCGGCGAGTCCAGCTGGTTCGTTCAACTCACCGCCGTTCAC
TTCGCCAAGCACGGTTTCGCCGTCTGTGCAATCGATCACCAAGGCCATGGCTTCTCCGAT
GGCCTCGTGGCTCATATACCCGACATTAACCCCGTCGTCGATGACTGTATCGCCTTCTTC
GATTCTTTCCGTCAGCGCCACGCGCCGCCATATCTTCCTTCGTTTCTCTACGCTGAATCT
CTCGGCGGCGCAATTGCACTTCTCATTACTCTCCGGCAGGGAGATTCTGCTCTAAATAGG
CCTTTTGACGGCGTCGTTTTGAACGGGGCCATGTGCGGTATCAGCGCTAAGTTCAAACCG
CCGTGGCCGTTGGAGCATCTTCTGGACATTGCAGCATTTCTCATTCCCACATGGCGCGTT
GTTCCCACTCGTGGCTCTATTCCTGAAGTCTCATTCAAGATGGAGTGGAAGAGGAAACTG
GCAGTGGCAAGCCCTAGGAGGCCACTGGGGAGACCACGAGCGGCGACGGCGCGTGAACTG
GTGAGAGTGTGCGGGGATCTGCAGAGGAGATTCGAAGAAGTGAAGGTGCCGTTCCTGGTC
ATACACGGCGGCGGGGACGTCGTCTGTGATCCGGCTTGCGTCGAGAACCTTTACCGGCGA
GCGTCTAGTGAAGACAAAACTCTGAATGTTTACCCCGGAATGTGGCACCAGCTGGTAGGA
GAACCGGAGGAGAATGTGGAACAAGTGTTTGGAGATGTTTTGGAGTGGCTGACAACCAGA
GCAGAGCGTGCCGCTGGGAAGAAAGCGGCAGAGGGCGGCGGCGCGTAG

Peptide Sequence

PEP ID

XP_016486119.1
PEP Infomation

PREDICTED: caffeoylshikimate esterase-like [Nicotiana tabacum]
Sequence

MKHPVAEANEVSPFGSLSPDEFYSHHSVSHGSEFITNSRGLKLFTQWWTPLPPANPIGVV
CVVHGFTGESSWFVQLTAVHFAKHGFAVCAIDHQGHGFSDGLVAHIPDINPVVDDCIAFF
DSFRQRHAPPYLPSFLYAESLGGAIALLITLRQGDSALNRPFDGVVLNGAMCGISAKFKP
PWPLEHLLDIAAFLIPTWRVVPTRGSIPEVSFKMEWKRKLAVASPRRPLGRPRAATAREL
VRVCGDLQRRFEEVKVPFLVIHGGGDVVCDPACVENLYRRASSEDKTLNVYPGMWHQLVG
EPEENVEQVFGDVLEWLTTRAERAAGKKAAEGGGA

Transcript Sequence

Gene sequence data has not been registered.